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NBRP Rat NBRP Rat (Rattus norvegicus) genome BAC clone

Rattus norvegicus genome BAC clones were developed by Dr. T. Serikawa, Kyoto Univ., RIKEN GSC and National BioResource Project.
NBRP Rat  National BioResource Project Rat  NBRP2

How to obtain clones?


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F344 and LE BAC browser



Forms


Sending forms
NBRP Rat BAC clone(s) is shipped as stab agar culture with 50 ug/ml Amp. in an individual tube. Please find ID of individual clone(s) using F344 and LE BAC browser.
Please complete following forms:
    Material Transfer Agreement, FormC (pdf)
    Order Form, FormA (MS-Word or pdf)
RNB1
F344/Stm
RDB No. 6273 NBRP rat BAC clone RNB1
Please specify ID of clone(s) ex. RNB1-456A01
RNB2
LE/Stm
RDB No. 6274 NBRP rat BAC clone RNB2
Please specify ID of clone(s) ex. RNB2-456A01
Terms and conditions for distribution:
In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of the following literature(s) designated by the DEPOSITOR is requested
The STAR Consortium, SNP and haplotype mapping for genetic analysis in the rat. Nat. Genet. 40, 560-566, 2008.
Send forms:
    The DNA Bank, RIKEN BioResource Center,
    3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan
    Fax: (+81)-29-836-9120
    e-mail: dnabank@brc.riken.jp
Further information for sale.
Fee
Links

BAC DNA preparation
 

DATA SHEET

1.RDB 6273NBRP rat BAC clone RNB1
1.1Strain information
SpeciesRattus norvegicus
StrainF344/Stm
1.2Clone information
VectorpKS145 (Ampr), SacI site
InsertSacI partial digestion
HostDH10B, E. coli
Nucleotide sequencesDNA Databank of Japan (DDBJ), DH508174-DH839445
Rattus_norvegicus_GSS_080325_1.seq.gz (331,272 entries),
ftp://ftp.ddbj.nig.ac.jp/ddbj_database/mass/Rattus_norvegicus_GSS/
Total number of clones
(384-well plate)
RNB1, ca. 238,000 clones (620 plates)
Average length116 kb
1.3Reference
1 The STAR Consortium, SNP and haplotype mapping for genetic analysis in the rat. Nat. Genet. 40, 560-566, 2008.
2 NBRP Rat http://www.anim.med.kyoto-u.ac.jp/nbr/
3 F344 and LE BAC browser
4 Rat Genome Database

1.RDB 6274NBRP rat BAC clone RNB2
1.1Strain information
SpeciesRattus norvegicus
StrainLE/Stm
1.2Clone information
VectorpKS145 (Ampr), SacI site
InsertSacI partial digestion
HostDH10B, E. coli
Nucleotide sequencesDNA Databank of Japan (DDBJ), FT000001-FT227486
Rattus_norvegicus_GSS_090401_1.seq.gz (227,486 entries),
ftp://ftp.ddbj.nig.ac.jp/ddbj_database/mass/Rattus_norvegicus_GSS/Rattus_norvegicus_GSS_090401_1.seq.gz
Total number of clones
(384-well plate)
RNB2, ca. 260,000 clones (677 plates)
Average length129 kb
1.3Reference
1 The STAR Consortium, SNP and haplotype mapping for genetic analysis in the rat. Nat. Genet. 40, 560-566, 2008.
2 NBRP Rat http://www.anim.med.kyoto-u.ac.jp/nbr/
3 F344 and LE BAC browser
4 Rat Genome Database



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2009.06.05